LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-203a-3p


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Filters

Gene
miRNA
Score
DIANA Links
XLOC_011696
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024372
Biotype: transcript isomorph
Gene id: XLOC_011696
Gene Name: XLOC_011696
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
- Kidney Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
96-111
0.088
0
7mer
124-138
0.062
0
8mer
2061-2073
0.055
0
8mer
350-362
0.055
0
8mer
1842-1856
0.052
0
7mer
342-353
0.048
0
7mer
37-49
0.046
0
7mer
2180-2200
0.045
0
7mer
50-64
0.044
0
7mer
418-426
0.043
0
7mer
2255-2267
0.042
0
7mer
2250-2262
0.042
0
7mer
381-397
0.042
0
7mer
1747-1758
0.040
0
7mer
2130-2139
0.040
0
7mer
151-163
0.037
0
7mer
220-234
0.036
0
7mer
2100-2109
0.035
0
7mer
235-247
0.035
0
7mer
164-173
0.035
0
7mer
2039-2052
0.034
0
7mer
1995-2007
0.034
0
7mer
137-150
0.033
0
7mer
1977-1989
0.033
0
7mer
2000-2015
0.033
0
7mer
307-318
0.032
0
7mer
268-282
0.031
0
8mer
568-580
0.031
0
7mer
329-341
0.031
0
7mer
273-287
0.030
0
7mer
1857-1871
0.028
0
7mer
359-370
0.028
0
7mer
292-304
0.027
0
7mer
433-445
0.027
0
7mer
332-349
0.026
0
7mer
402-417
0.026
0
7mer
1734-1746
0.026
0
7mer
1829-1841
0.026
0
7mer
164-181
0.026
0
7mer
396-409
0.026
0
7mer
1794-1806
0.025
0
7mer
1780-1793
0.025
0
7mer
483-492
0.024
0
7mer
510-523
0.024
0
7mer
1798-1814
0.024
0
7mer
483-500
0.023
0
7mer
1815-1828
0.023
0
7mer
1694-1705
0.022
0
7mer
601-613
0.021
0
6mer
2100-2117
0.021
0
7mer
619-633
0.021
0
7mer
1252-1274
0.021
0
6mer
130-145
0.021
0
7mer
1631-1643
0.021
0
7mer
581-595
0.021
0
7mer
1608-1620
0.020
0
7mer
649-661
0.020
0
6mer
2079-2099
0.020
0
6mer
147-158
0.020
0
7mer
1613-1625
0.020
0
7mer
563-575
0.019
0
7mer
1559-1571
0.019
0
7mer
718-730
0.019
0
6mer
2045-2060
0.019
0
7mer
1564-1576
0.018
0
7mer
654-669
0.018
0
6mer
182-199
0.018
0
7mer
690-712
0.018
0
7mer
731-743
0.018
0
7mer
1475-1493
0.017
0
7mer
764-776
0.017
0
7mer
764-784
0.016
0
7mer
1678-1692
0.015
0
6mer
1898-1910
0.015
0
7mer
1455-1467
0.015
0
6mer
381-393
0.015
0
7mer
1424-1436
0.014
0
7mer
871-884
0.014
0
7mer
1450-1462
0.014
0
7mer
1341-1353
0.014
0
7mer
969-981
0.014
0
7mer
1357-1371
0.013
0
7mer
1314-1330
0.013
0
7mer
885-894
0.013
0
7mer
928-943
0.012
0
6mer
546-562
0.012
0
6mer
1811-1823
0.012
0
7mer
1212-1224
0.012
0
7mer
1199-1211
0.011
0
6mer
1911-1920
0.011
0
7mer
1173-1185
0.011
0
7mer
1212-1232
0.011
0
6mer
578-590
0.011
0
7mer
1150-1159
0.011
0
7mer
65-77
0.011
Not Conserved
7mer
1061-1070
0.010
0
7mer
1017-1029
0.010
0
7mer
1287-1299
0.010
0
7mer
1117-1131
0.010
0
7mer
997-1016
0.010
0
7mer
1088-1101
0.010
0
7mer
1084-1096
0.009
0
7mer
1071-1083
0.009
0
6mer
1387-1401
0.009
0
6mer
794-804
0.008
0
7mer
1962-1976
0.008
Not Conserved
6mer
1446-1457
0.008
0
7mer
1046-1060
0.008
0
7mer
1885-1897
0.008
Not Conserved
6mer
1437-1449
0.008
0
7mer
1922-1933
0.007
Not Conserved
6mer
1372-1381
0.007
0
6mer
1393-1408
0.007
0
7mer
1872-1884
0.007
Not Conserved
6mer
1409-1426
0.007
0
6mer
1406-1418
0.007
0
6mer
2241-2252
0.007
Not Conserved
6mer
1354-1366
0.007
0
7mer
460-472
0.007
Not Conserved
7mer
1934-1943
0.007
Not Conserved
6mer
1266-1281
0.006
0
7mer
1533-1545
0.006
Not Conserved
7mer
1644-1653
0.006
Not Conserved
6mer
1030-1042
0.006
0
6mer
1283-1294
0.006
0
6mer
2234-2244
0.006
Not Conserved
6mer
1008-1024
0.006
0
8mer
1102-1116
0.005
Not Conserved
6mer
1132-1141
0.005
0
6mer
2147-2170
0.005
Not Conserved
6mer
1117-1126
0.005
0
6mer
1061-1078
0.005
0
7mer
1273-1286
0.005
Not Conserved
6mer
1296-1307
0.005
0
7mer
1582-1594
0.005
Not Conserved
7mer
1663-1672
0.005
Not Conserved
7mer
690-704
0.004
Not Conserved
7mer
851-870
0.004
Not Conserved
7mer
670-679
0.004
Not Conserved
7mer
815-827
0.004
Not Conserved
7mer
923-935
0.004
Not Conserved
7mer
992-1005
0.003
Not Conserved
6mer
559-570
0.003
Not Conserved
7mer
1233-1245
0.003
Not Conserved
6mer
851-865
0.002
Not Conserved
6mer
1507-1520
0.002
Not Conserved
chr22-38_28785274-29006793.1
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
127021-127028
0.023
13
8mer
191628-191645
0.011
1
8mer
18722-18747
0.009
1
9mer
206428-206452
0.009
0
8mer
245114-245126
0.008
0
8mer
196981-197008
0.007
1
7mer
260556-260571
0.006
0
8mer
258507-258522
0.006
1
7mer
174668-174693
0.006
0
6mer
267192-267217
0.006
2
7mer
897-921
0.005
0
8mer
210810-210825
0.005
1
7mer
67613-67638
0.005
1
7mer
17480-17499
0.005
1
8mer
211580-211590
0.005
1
8mer
227727-227748
0.005
0
8mer
78058-78080
0.005
1
7mer
19530-19547
0.005
1
7mer
248855-248870
0.005
0
7mer
256395-256407
0.005
0
7mer
198069-198090
0.004
0
7mer
140799-140817
0.004
1
7mer
64568-64589
0.004
1
7mer
29349-29365
0.004
2
7mer
244491-244510
0.004
0
7mer
50565-50577
0.004
3
7mer
45811-45824
0.004
1
7mer
207617-207644
0.004
2
6mer
145606-145625
0.004
5
7mer
70083-70103
0.004
1
8mer
118789-118815
0.004
0
8mer
257483-257508
0.003
1
7mer
54548-54570
0.003
2
7mer
156023-156045
0.003
2
7mer
15856-15873
0.003
1
7mer
200129-200156
0.003
0
6mer
164052-164066
0.003
7
7mer
37801-37816
0.003
0
6mer
210381-210405
0.003
7
7mer
56525-56549
0.003
2
7mer
64000-64017
0.003
0
6mer
152936-152954
0.003
4
6mer
59684-59703
0.003
3
7mer
29431-29450
0.003
0
7mer
242962-242975
0.003
0
7mer
202545-202570
0.003
Not Conserved
6mer
19845-19864
0.003
1
6mer
110750-110768
0.002
1
6mer
163380-163400
0.002
3
6mer
14094-14120
0.002
1
6mer
107296-107319
0.002
2
6mer
164346-164366
0.002
0
6mer
159956-159982
0.002
3
6mer
46326-46346
0.002
1
7mer
264447-264466
0.002
1
6mer
94578-94597
0.002
4
6mer
4885-4897
0.002
2
6mer
76810-76832
0.002
4
6mer
31844-31862
0.002
3
7mer
57038-57062
0.002
1
6mer
32267-32285
0.002
4
6mer
59207-59230
0.002
3
6mer
258973-258984
0.002
0
6mer
150983-151010
0.002
2
6mer
172539-172558
0.002
1
6mer
38032-38057
0.002
1
6mer
154951-154968
0.002
1
6mer
157016-157032
0.002
2
6mer
111532-111551
0.002
0
6mer
175727-175745
0.002
1
6mer
244949-244966
0.002
0
6mer
156361-156383
0.002
1
7mer
260837-260850
0.002
1
6mer
50237-50247
0.002
0
6mer
124934-124947
0.002
3
6mer
5515-5535
0.002
0
6mer
11148-11165
0.002
1
6mer
18591-18607
0.002
0
6mer
47270-47289
0.002
2
7mer
241120-241136
0.002
0
6mer
71214-71231
0.002
1
6mer
117048-117070
0.002
2
6mer
90534-90544
0.002
1
6mer
170533-170560
0.002
0
6mer
155105-155121
0.002
3
6mer
48492-48501
0.002
0
6mer
249863-249883
0.002
0
6mer
5903-5918
0.002
0
6mer
20394-20410
0.002
3
6mer
78511-78524
0.002
0
6mer
17005-17025
0.002
1
6mer
201626-201652
0.002
Not Conserved
6mer
160789-160804
0.002
1
6mer
24591-24612
0.002
1
6mer
9609-9631
0.002
1
6mer
203550-203570
0.002
1
6mer
44873-44885
0.002
1
6mer
150502-150513
0.002
2
7mer
101652-101675
0.002
1
6mer
191096-191112
0.002
3
6mer
48639-48665
0.002
1
6mer
138075-138087
0.002
0
7mer
261334-261353
0.002
0
6mer
182542-182554
0.002
0
6mer
238474-238494
0.002
1
6mer
251494-251514
0.002
0
6mer
138749-138761
0.002
1
6mer
80152-80176
0.002
2
6mer
171968-171988
0.002
1
6mer
196255-196278
0.002
1
6mer
122862-122872
0.002
1
6mer
10681-10699
0.002
1
6mer
247175-247190
0.002
0
6mer
125773-125789
0.002
1
6mer
70391-70402
0.002
1
6mer
118197-118223
0.002
2
6mer
110159-110178
0.002
1
6mer
98200-98210
0.002
0
6mer
229526-229543
0.002
0
6mer
147327-147346
0.002
1
6mer
82263-82284
0.002
1
6mer
99881-99907
0.002
2
6mer
205068-205083
0.002
1
6mer
203671-203696
0.002
0
6mer
205900-205919
0.002
0
6mer
185274-185284
0.002
1
6mer
194471-194490
0.002
1
6mer
80952-80970
0.001
1
7mer
105561-105577
0.001
0
6mer
90239-90258
0.001
1
6mer
124003-124029
0.001
1
6mer
9792-9806
0.001
1
6mer
19263-19276
0.001
0
6mer
52411-52430
0.001
0
6mer
133144-133163
0.001
0
6mer
40730-40746
0.001
3
6mer
97597-97619
0.001
2
6mer
3626-3648
0.001
0
6mer
43941-43960
0.001
1
6mer
82501-82519
0.001
0
6mer
95500-95519
0.001
1
6mer
64520-64533
0.001
1
6mer
182004-182014
0.001
1
6mer
66059-66078
0.001
0
6mer
79889-79908
0.001
1
6mer
133674-133698
0.001
1
6mer
91466-91485
0.001
1
6mer
76191-76210
0.001
1
6mer
138390-138409
0.001
0
6mer
222911-222935
0.001
0
6mer
77571-77588
0.001
0
6mer
70117-70129
0.001
5
6mer
233187-233208
0.001
0
6mer
227320-227335
0.001
0
6mer
139559-139576
0.001
0
6mer
97228-97246
0.001
1
6mer
90776-90795
0.001
1
6mer
94960-94979
0.001
1
6mer
243752-243764
0.001
0
6mer
15508-15527
0.001
1
6mer
218433-218452
0.001
1
6mer
248452-248478
0.001
0
6mer
176216-176228
0.001
0
6mer
4979-5003
0.001
2
6mer
133846-133865
0.001
1
6mer
36860-36879
0.001
0
6mer
168846-168858
0.001
2
6mer
136539-136558
0.001
0
6mer
229028-229041
0.001
1
6mer
27419-27438
0.001
Not Conserved
6mer
238805-238828
0.001
0
6mer
127785-127804
0.001
0
6mer
17823-17842
0.001
1
6mer
255044-255058
0.001
1
6mer
134832-134852
0.001
0
6mer
243220-243239
0.001
0
6mer
244692-244711
0.001
0
6mer
247496-247515
0.001
0
7mer
211646-211665
0.001
0
6mer
46402-46416
0.001
1
6mer
71945-71966
0.001
0
6mer
17067-17089
0.001
1
6mer
71049-71068
0.001
0
6mer
165041-165063
0.001
1
6mer
18957-18975
0.001
0
6mer
37377-37396
0.001
0
6mer
76453-76468
0.001
1
6mer
112630-112643
0.001
0
7mer
76459-76479
0.001
0
6mer
70924-70937
0.001
Not Conserved
6mer
78153-78167
0.001
0
6mer
219141-219160
0.001
1
6mer
236928-236952
0.001
0
6mer
155162-155169
0.001
1
6mer
219018-219031
0.001
0
6mer
112747-112772
0.001
0
6mer
159987-159997
0.001
2
6mer
142504-142528
0.001
1
6mer
201686-201703
0.001
Not Conserved
6mer
44894-44916
0.001
1
6mer
260873-260899
0.001
1
6mer
134915-134928
0.000
1
XLOC_002204
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr2
Transcript: TCONS_00004331
Biotype: transcript isomorph
Gene id: XLOC_002204
Gene Name: XLOC_002204
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Kidney Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
325-351
0.043
1
8mer
195-207
0.038
0
7mer
253-265
0.034
1
7mer
227-242
0.033
1
7mer
33-45
0.024
0
7mer
91-100
0.023
0
7mer
130-156
0.023
0
7mer
76-85
0.021
0
7mer
312-324
0.018
0
7mer
46-55
0.018
0
7mer
182-197
0.015
Not Conserved
7mer
200-211
0.012
Not Conserved
7mer
177-194
0.012
Not Conserved
7mer
208-220
0.011
Not Conserved
7mer
86-100
0.011
Not Conserved
7mer
10-22
0.011
Not Conserved
7mer
23-32
0.011
Not Conserved
7mer
125-139
0.011
Not Conserved
6mer
167-176
0.010
0
7mer
66-75
0.010
Not Conserved
6mer
187-193
0.010
0
6mer
213-226
0.010
0
6mer
158-176
0.009
0
7mer
271-283
0.008
Not Conserved
RP4-705D16.3
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 20
Transcript: ENST00000425939
Biotype: antisense
Gene id: ENSG00000228809
Gene Name: RP4-705D16.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
23-42
0.324
4
AC006548.28
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
9154-9179
0.015
1
7mer
15509-15527
0.007
2
7mer
9663-9681
0.007
0
7mer
40266-40291
0.006
1
7mer
44108-44134
0.005
1
8mer
26649-26671
0.005
0
7mer
8472-8491
0.004
2
7mer
70467-70485
0.004
0
7mer
63740-63767
0.004
1
8mer
8822-8840
0.004
Not Conserved
7mer
76954-76964
0.004
0
6mer
1029-1046
0.003
0
7mer
75756-75766
0.003
0
7mer
46438-46447
0.003
Not Conserved
6mer
37795-37817
0.003
1
7mer
70170-70183
0.003
Not Conserved
6mer
1751-1764
0.002
1
7mer
75461-75482
0.002
0
6mer
74013-74022
0.002
1
6mer
72596-72608
0.002
0
6mer
81052-81063
0.002
0
6mer
68703-68710
0.002
0
6mer
44868-44885
0.002
1
6mer
69374-69395
0.002
Not Conserved
6mer
31229-31242
0.002
0
7mer
70362-70383
0.002
0
6mer
37307-37329
0.002
1
6mer
16295-16318
0.002
2
6mer
26435-26450
0.002
0
6mer
78527-78541
0.002
0
6mer
57149-57166
0.002
1
6mer
55323-55334
0.002
1
6mer
66374-66392
0.002
0
6mer
67420-67436
0.002
Not Conserved
6mer
2268-2281
0.002
1
6mer
22526-22545
0.002
2
6mer
16946-16961
0.002
1
6mer
54077-54092
0.002
Not Conserved
6mer
59081-59091
0.002
1
6mer
28436-28445
0.002
1
6mer
30499-30520
0.001
1
6mer
68305-68323
0.001
0
6mer
46223-46230
0.001
Not Conserved
6mer
50832-50843
0.001
Not Conserved
6mer
77529-77538
0.001
0
6mer
64576-64596
0.001
1
6mer
25179-25203
0.001
1
6mer
23938-23952
0.001
0
7mer
82289-82309
0.001
1
6mer
47153-47175
0.001
Not Conserved
6mer
26355-26381
0.001
0
6mer
8931-8950
0.001
Not Conserved
6mer
72501-72521
0.001
0
6mer
46144-46170
0.001
Not Conserved
6mer
62867-62890
0.001
0
6mer
75576-75601
0.001
0
6mer
75361-75383
0.001
0
6mer
72059-72078
0.001
Not Conserved
6mer
46069-46092
0.001
Not Conserved
6mer
75541-75557
0.001
0
MIR6818
hsa-miR-203a-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624945
Biotype: antisense
Gene id: ENSG00000279159
Gene Name: MIR6818
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
16168-16190
0.009
1
8mer
17036-17045
0.008
1
7mer
20008-20017
0.007
1
8mer
43955-43966
0.006
5
6mer
1212-1235
0.006
7
8mer
37193-37214
0.006
1
7mer
16687-16706
0.005
3
7mer
28429-28452
0.005
5
7mer
33716-33732
0.005
3
7mer
5640-5656
0.005
1
7mer
14324-14336
0.005
0
6mer
48527-48552
0.004
7
8mer
30358-30374
0.004
0
6mer
12103-12119
0.004
5
7mer
12790-12806
0.004
4
7mer
29684-29706
0.004
3
7mer
18425-18436
0.004
0
7mer
11312-11335
0.003
2
7mer
35420-35441
0.003
0
6mer
5880-5894
0.003
4
8mer
12734-12751
0.003
1
7mer
5405-5414
0.003
Not Conserved
6mer
362-381
0.003
0
6mer
26405-26422
0.002
2
6mer
12687-12709
0.002
11
6mer
33966-33978
0.002
5
6mer
33473-33489
0.002
4
6mer
17620-17646
0.002
1
6mer
12481-12497
0.002
1
6mer
25287-25299
0.002
3
6mer
15929-15953
0.002
2
6mer
27417-27429
0.002
4
6mer
29165-29182
0.002
1
6mer
38775-38787
0.002
3
6mer
13740-13752
0.002
2
6mer
2705-2724
0.002
1
6mer
31852-31875
0.001
1
6mer
22261-22280
0.001
1
6mer
20363-20376
0.001
1
6mer
16959-16977
0.001
5
6mer
43887-43906
0.001
7
6mer
43996-44014
0.001
0
6mer
21331-21350
0.001
0
6mer
40075-40095
0.001
0
7mer
20326-20340
0.001
2
6mer
3079-3101
0.001
0
KCNQ1OT1
hsa-miR-203a-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18922-18946
0.008
1
8mer
40473-40495
0.007
Not Conserved
7mer
7303-7318
0.007
1
8mer
73904-73929
0.006
1
8mer
76634-76658
0.006
2
9mer
72715-72735
0.005
0
6mer
44036-44058
0.005
7
7mer
41599-41612
0.004
0
7mer
58734-58744
0.004
3
7mer
57615-57633
0.004
1
7mer
52702-52722
0.004
1
7mer
52004-52014
0.004
0
7mer
24791-24807
0.003
1
7mer
36002-36011
0.003
0
6mer
68779-68794
0.003
3
6mer
87692-87716
0.003
2
6mer
52136-52156
0.003
2
6mer
23339-23352
0.003
1
6mer
78135-78160
0.003
1
6mer
69140-69152
0.002
1
6mer
21366-21376
0.002
0
6mer
40082-40105
0.002
0
6mer
4378-4403
0.002
1
7mer
68765-68776
0.002
1
6mer
30126-30137
0.002
0
7mer
47232-47244
0.002
1
6mer
88612-88620
0.002
1
6mer
20796-20810
0.002
0
7mer
74463-74482
0.002
0
6mer
67640-67662
0.002
2
6mer
75352-75374
0.002
1
6mer
47413-47422
0.002
1
6mer
38457-38476
0.002
0
6mer
69943-69967
0.002
0
7mer
75259-75272
0.001
1
6mer
22726-22751
0.001
0
6mer
83231-83257
0.001
3
6mer
83333-83347
0.001
1
6mer
23674-23693
0.001
0
6mer
62042-62064
0.001
1
6mer
5076-5098
0.001
Not Conserved
6mer
80795-80813
0.001
0
6mer
69925-69936
0.001
1
7mer
72661-72669
0.001
0
6mer
88605-88626
0.001
1
6mer
57602-57627
0.001
0
XLOC_003200
hsa-miR-203a-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006577
Biotype: transcript isomorph
Gene id: XLOC_003200
Gene Name: XLOC_003200
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Brain Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Lung Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1335-1357
0.053
6
8mer
635-659
0.041
3
8mer
527-544
0.020
1
6mer
211-230
0.004
1
6mer
971-980
0.004
1
RP11-352B15.2
hsa-miR-203a-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000564385
Biotype: lincRNA
Gene id: ENSG00000260611
Gene Name: RP11-352B15.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
62-87
0.100
0
6mer
221-243
0.016
0
LL22NC03-22D1.1
hsa-miR-203a-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000624601
Biotype: lincRNA
Gene id: ENSG00000279003
Gene Name: LL22NC03-22D1.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
28812-28831
0.018
Not Conserved
8mer
914-926
0.011
2
8mer
7898-7913
0.009
0
7mer
230-249
0.008
0
6mer
1381-1400
0.007
9
7mer
17660-17685
0.006
4
6mer
156-176
0.006
0
7mer
14317-14338
0.005
1
6mer
48-64
0.005
1
7mer
21632-21652
0.004
Not Conserved
7mer
17034-17057
0.003
1
7mer
6894-6912
0.002
0
6mer
5238-5248
0.002
4
7mer
1897-1909
0.002
1
6mer
23779-23799
0.002
2
6mer
23458-23476
0.002
1
6mer
9419-9439
0.002
2
6mer
15978-15998
0.002
1
6mer
24838-24851
0.002
1
6mer
5753-5765
0.002
1
6mer
18554-18567
0.002
1
6mer
14020-14035
0.002
0
6mer
12857-12869
0.002
1
6mer
23037-23055
0.002
1
6mer
16221-16240
0.001
2
6mer
10125-10147
0.001
0
6mer
11867-11886
0.001
Not Conserved
6mer
21747-21771
0.001
0
6mer
23121-23139
0.000
0
CTBP1-AS2
hsa-miR-203a-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 4
Transcript: ENST00000505364
Biotype: antisense
Gene id: ENSG00000196810
Gene Name: CTBP1-AS2
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2143-2161
0.103
1
6mer
1294-1320
0.010
1
RP11-363G2.4
hsa-miR-203a-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 13
Transcript: ENST00000445646
Biotype: lincRNA
Gene id: ENSG00000229556
Gene Name: RP11-363G2.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1458-1483
0.072
0
6mer
76-90
0.017
0
6mer
1058-1074
0.011
0
6mer
1204-1218
0.009
0
RP3-323A16.1
hsa-miR-203a-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
30821-30843
0.018
0
8mer
13676-13702
0.009
4
9mer
51695-51709
0.008
1
8mer
44457-44474
0.008
3
7mer
13742-13763
0.006
7
7mer
19434-19457
0.004
2
8mer
9728-9740
0.004
0
7mer
23773-23784
0.004
1
7mer
24977-24986
0.003
0
6mer
386-405
0.003
1
7mer
43742-43768
0.003
0
7mer
29724-29736
0.003
1
6mer
27253-27267
0.002
1
6mer
44161-44184
0.002
4
6mer
2495-2508
0.002
1
6mer
51461-51478
0.002
1
6mer
40671-40680
0.002
0
7mer
6946-6967
0.002
Not Conserved
7mer
41024-41044
0.002
1
6mer
6582-6593
0.002
0
6mer
15691-15713
0.002
3
6mer
25520-25531
0.002
1
6mer
31288-31306
0.002
0
6mer
21710-21722
0.002
1
6mer
25978-25998
0.002
1
6mer
33670-33694
0.002
0
6mer
47875-47884
0.001
1
6mer
3829-3848
0.001
0
6mer
41704-41726
0.001
1
6mer
50810-50833
0.001
0
6mer
2633-2648
0.001
0
6mer
31026-31045
0.001
Not Conserved
RP11-445O3.3
hsa-miR-203a-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000562127
Biotype: lincRNA
Gene id: ENSG00000260763
Gene Name: RP11-445O3.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
3257-3277
0.077
0
7mer
601-620
0.020
0
6mer
1680-1699
0.006
0
RP11-107I14.5
hsa-miR-203a-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000450669
Biotype: lincRNA
Gene id: ENSG00000230967
Gene Name: RP11-107I14.5
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
374-391
0.079
12
7mer
250-274
0.017
9
LINC00662
hsa-miR-203a-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: NR_027301.1
Biotype: lincRNA
Gene id: NR_027301.1 (gene)
Gene Name: LINC00662
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
220-244
0.024
0
6mer
266-292
0.023
0
6mer
171-191
0.019
0
6mer
148-169
0.015
0
6mer
1224-1243
0.014
0
LINC00662
hsa-miR-203a-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000590523
Biotype: lincRNA
Gene id: ENSG00000261824
Gene Name: LINC00662
UCSC graphic:
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
HeLa Cervix Cancer/Malignant
- Colon Normal/Primary
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
HREpiC Kidney Normal/Primary
- Liver Normal/Primary
HepG2 Liver Cancer/Malignant
- Lung Normal/Primary
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
- Lymph Node Normal/Primary
HMEpC Mammary Gland Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
222-246
0.024
0
6mer
268-294
0.023
0
6mer
173-193
0.019
0
6mer
150-171
0.015
0
6mer
1226-1245
0.014
0
LINC01002
hsa-miR-203a-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000618269
Biotype: lincRNA
Gene id: ENSG00000206082
Gene Name: LINC01002
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
793-812
0.094
1
RPA3-AS1
hsa-miR-203a-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: 7
Transcript: NR_034084.1
Biotype: sense
Gene id: NR_034084.1 (gene)
Gene Name: RPA3-AS1
UCSC graphic: -
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2138-2150
0.057
5
7mer
539-556
0.018
7
6mer
171-182
0.011
8
6mer
1713-1739
0.008
4
XLOC_011092
hsa-miR-203a-3p
0.994
mTTBlnEmP

Gene Details
Chromosome: chr14
Transcript: TCONS_00022821
Biotype: transcript isomorph
Gene id: XLOC_011092
Gene Name: XLOC_011092
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Breast Normal/Primary


miRNA Details
Name: hsa-miR-203a-3p
Sequence: gugaaauguuuaggaccacuag
MirBase ID: MIMAT0000264
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
182-206
0.061
4
7mer
187-206
0.025
2
6mer
192-206
0.007
2
Funded by:
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